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BACKLOG #99: the live-session seed (nomarchy-seed-flake) did a bare `cp -r` with no `git init`, so `~/.nomarchy` was not a repo in the live session and nomarchy-doctor's `git ls-files --error-unmatch theme-state.json` false-alarmed "theme-state.json is NOT git-tracked" (installed systems commit at nomarchy-install.sh:654 and were always fine). The seed now init+add+commits, exactly like the installer. Verified: V2 — focused serial-log VM run (/tmp/nomarchy-v2-theme-99/): doctor prints "theme-state.json is git-tracked" and "flake checkout is clean"; GIT_REPO_OK / TRACKED_OK markers. A drv-equivalence test proves the seed change is build-neutral: homeConfigurations.<user>.activationPackage is byte-identical path-seeded vs git-seeded (bvl30ggn...-home-manager-generation.drv). nix flake check green. The same run exposed a separate, pre-existing failure — offline theme switching in the live session rebuilds from source and dies offline — filed as BACKLOG #113 (NOT caused by this change: same drv either way). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Agent instructions + loop state
Everything an AI agent needs to work on Nomarchy, vendor-neutral and git-tracked. Protocol: LOOP.md. Entry point for every harness: repo-root AGENTS.md.
Instructions (how to work)
| File | Who writes | Role |
|---|---|---|
| LOOP.md | Human | One-iteration protocol (orient → pick → work → verify → commit → record) + the V0–V3 ladder |
| VERIFICATION.md | Human (agents propose) | Enforcement: preflight, honesty rules, visual protocol, hardware-blocked checks, reporting |
| DELEGATION.md | Human (agents propose) | Capability tiers, scout/runner roles, token economy, parallel fan-out |
| GOALS.md | Human (agents propose) | Pillars, quality bars, non-goals |
| CONVENTIONS.md | Human (agents propose) | How to write code/menu/state while shipping |
| THEME-DESIGN.md | Human (agents propose) | Theme/visual design instructions |
State (what's happening)
| File | Who writes | Role |
|---|---|---|
| BACKLOG.md | Both | Prioritized queue — only executable work list |
| JOURNAL.md | Agents | Append-only iteration log (read last 3–5 entries; older → JOURNAL-ARCHIVE.md) |
| MEMORY.md | Agents | Curated durable gotchas |
| HARDWARE-QUEUE.md | Agents append, human checks | On-hardware V3 tests only Bernardo can run |
Product / design docs (not a queue)
| File | Role |
|---|---|
| ../docs/VISION.md | v1.0 product themes — agents slice into BACKLOG PROPOSED |
| ../docs/ROADMAP.md | Design history + shipped log |
| ../docs/README.md | Full docs map |
Harness adapters (vendor-specific, thin)
Shared content never lives in an adapter — adapters only register/route into the files above, in whatever format their harness requires.
| Path | Harness | Role |
|---|---|---|
| ../AGENTS.md | any | Entry point (CLAUDE.md is a symlink to it) |
| ../.claude/settings.json | Claude Code | Tool permissions |
| ../.claude/agents/ | Claude Code | nomarchy-scout / nomarchy-runner role defs (contracts in DELEGATION.md) |
Do not put backlog items, vision text, or policy under an adapter directory — it is not shared with other agent runners.
Rules of thumb
- Execute from BACKLOG only (NOW → NEXT; never PROPOSED without human triage).
- Orient with GOALS + CONVENTIONS + MEMORY + last journal + BACKLOG; when the task is product-shaped, also read the relevant VISION §.
- Record lasting design in ROADMAP ✓ when something ships that future humans should know; delete the BACKLOG line.
- v1 branch is human-only — never advance from an agent session.